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HomeGuidesGST on E-commerce
FY 2025-26 · AY 2026-27
Updated August 2026

GST on Notified Services by E-commerce Operators u/s 9(5)Comprehensive Guide for FY 2025-26

Understand the nuances of GST applicability on notified services provided through e-commerce platforms under Section 9(5) of the CGST Act. This guide covers registration, compliance, and tax liability specifics.

Table of Contents
1

Applicability of Section 9(5) of CGST Act


2

Differences Between Section 9(5) and Section 52


3

GST Registration for E-commerce Operators


4

Compliance and Return Filing


5

FAQs on GST for E-commerce Operators

Applicability of Section 9(5) of CGST Act

Section 9(5) of the CGST Act mandates that the tax liability for certain services provided through e-commerce platforms falls on the e-commerce operator.

  1. Services Covered

    The following services are covered under Section 9(5):

    • Passenger transport services, including app-based cab services.

    • Restaurant services, including cloud kitchens.

    • Housekeeping and accommodation services.

  2. Tax Liability

    The e-commerce operator is liable to pay GST as if they are the supplier.

    • Liability applies even if the actual supplier is not registered under GST.

    • GST is paid under the reverse charge mechanism.

    • No Input Tax Credit (ITC) can be claimed by the operator.

  3. Rate of Tax

    The applicable GST rate for these services:

    • 5% GST rate for restaurant services.

    • 18% GST rate for passenger transport services.

    • 12% GST rate for accommodation services.

  4. Invoice Issuance

    Invoices for these services must be issued by the e-commerce operator.

    • Separate invoices for each service category.

    • Operator must maintain records of all transactions.

    • Invoices should reflect the GST paid under reverse charge.

The responsibility of tax payment under Section 9(5) ensures compliance and simplifies tax collection from unregistered suppliers.

Differences Between Section 9(5) and Section 52

  1. Tax Collection Mechanism

    Understanding the difference in tax collection:

    • Section 9(5) involves reverse charge mechanism.

    • Section 52 involves Tax Collected at Source (TCS).

    • TCS is collected on net value of taxable supplies.

  2. Registration Requirements

    Differences in GST registration obligations:

    • Section 9(5) requires mandatory registration for operators.

    • Section 52 requires registration for both operators and suppliers.

    • Voluntary registration option for suppliers under Section 9(5).

  3. Threshold Exemptions

    Applicability of threshold exemptions:

    • No threshold exemption under Section 52.

    • Threshold exemption applicable for suppliers under Section 9(5).

    • Operators must register regardless of turnover.

  4. Compliance Forms

    Forms required for compliance under each section:

    • Section 9(5) requires filing of Form GSTR-3B.

    • Section 52 requires filing of Form GSTR-8.

    • Details in GSTR-8 reflect in supplier's Form 2A.

GST Registration for E-commerce Operators

  1. Mandatory Registration

    E-commerce operators must register under GST:

    • Registration is mandatory irrespective of turnover.

    • Operators must obtain a separate GSTIN for each state.

    • Registration must be completed before commencing operations.

  2. Registration Process

    Steps to register as an e-commerce operator:

    • Apply online via the GST portal.

    • Submit required documents including PAN and proof of business.

    • Receive GSTIN upon successful verification.

  3. Voluntary Registration for Suppliers

    Suppliers can opt for voluntary registration:

    • Allows claiming of Input Tax Credit.

    • Facilitates compliance and transparency.

    • Not mandatory if turnover is below threshold.

  4. Impact of Non-Registration

    Consequences of failing to register:

    • Penalties under Section 122 of the CGST Act.

    • Inability to claim Input Tax Credit.

    • Legal action for non-compliance with GST laws.

Compliance and Return Filing

  1. Monthly Return Filing

    Operators must file monthly returns:

    • File Form GSTR-3B by the 20th of the following month.

    • Include details of outward supplies and tax liability.

    • Ensure accurate reporting to avoid penalties.

  2. Annual Return Filing

    Annual compliance requirements:

    • File Form GSTR-9 by 31st December of the following year.

    • Reconcile monthly returns with annual data.

    • Include audited financial statements if turnover exceeds ₹2 crore.

  3. Payment of Tax

    Tax payment obligations for operators:

    • Pay GST via electronic cash ledger.

    • Ensure timely payment to avoid interest charges.

    • Maintain sufficient balance in cash ledger for tax dues.

  4. Record Keeping

    Maintain comprehensive records for audit purposes:

    • Keep records of all invoices and transactions.

    • Ensure records are accessible for at least 6 years.

    • Facilitate smooth audit processes with organized documentation.

Adhering to compliance requirements ensures smooth operations and avoids legal complications for e-commerce operators.

FAQs on GST for E-commerce Operators

What is the GST rate for restaurant services provided through e-commerce?

The GST rate for restaurant services, including cloud kitchens, provided through e-commerce platforms is 5% under Section 9(5) of the CGST Act.


Are e-commerce operators required to register for GST?

Yes, e-commerce operators must mandatorily register for GST irrespective of their turnover, as per Section 9(5) of the CGST Act.


How does Section 9(5) differ from Section 52 regarding tax collection?

Section 9(5) involves the reverse charge mechanism where the operator pays the tax, while Section 52 involves TCS collected on the net value of supplies.


Can suppliers opt for voluntary GST registration under Section 9(5)?

Yes, suppliers can opt for voluntary registration to claim Input Tax Credit, although it is not mandatory if their turnover is below the threshold.


What forms are required for compliance under Section 9(5)?

E-commerce operators must file Form GSTR-3B monthly and Form GSTR-9 annually for compliance under Section 9(5).


What happens if an operator fails to register under GST?

Failure to register can result in penalties under Section 122 of the CGST Act, inability to claim ITC, and potential legal action.


Is Input Tax Credit available for operators under Section 9(5)?

No, e-commerce operators cannot claim Input Tax Credit for services covered under Section 9(5) as they pay GST under the reverse charge mechanism.


What is the deadline for filing annual GST returns?

The deadline for filing the annual GST return, Form GSTR-9, is 31st December of the following financial year.


How should e-commerce operators issue invoices for notified services?

E-commerce operators must issue separate invoices for each category of notified services, ensuring they reflect the GST paid under reverse charge.


What are the consequences of non-compliance with GST laws?

Non-compliance can lead to penalties, interest charges, and legal action. It is crucial for operators to adhere to all GST regulations and filing requirements.

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